Skill Store 33

Sqlcipher

SQLCipher — transparent AES-256 encryption for SQLite databases.

by claude-dev-suite · MIT

The skill

SQLCipher — transparent AES-256 encryption for SQLite databases. Drop-in SQLite replacement used by mobile wallets, password managers, and offline-first apps storing sensitive data. Covers key derivation (PBKDF2), key rotation, performance tuning, integration in Rust (rusqlite + bundled-sqlcipher feature), Android (sqlcipher-android), iOS (SQLCipher.framework or Swift package), KMP (SQLDelight + SQLCipher driver), license model (community BSD-3 vs commercial). USE WHEN: user mentions "SQLCipher", "encrypted SQLite", "PRAGMA key", "PRAGMA rekey", "sqlite-cipher", "rusqlite bundled-sqlcipher", "encrypted database for mobile wallet", "SQLDelight encryption" DO NOT USE FOR: Plain SQLite without encryption - use `databases/sqlite` (or relevant skill) DO NOT USE FOR: Server-side encrypted DB (use TDE) - use `databases/postgresql` etc. DO NOT USE FOR: Encryption primitives outside SQLite - use `security/libsodium`

SQLCipher

Deep Knowledge: Use mcp__documentation__fetch_docs with technology: sqlcipher.

What SQLCipher Is

SQLCipher is a fork of SQLite that adds transparent, page-level AES-256-CBC encryption (default, configurable to GCM in 4.6+). Each database page is encrypted before write and decrypted after read, with HMAC-SHA512 authentication per page.

Properties:

  • API-compatible with SQLite — same SQL, same C API, drop-in
  • Key derivation: PBKDF2-HMAC-SHA512 with 256k iterations (default in 4.x)
  • Random salt per database (stored in first 16 bytes of file)
  • Per-page IV
  • Slight performance overhead (~5-15% depending on workload)

License: BSD-3 community edition (everything you need for production wallets). Commercial license adds enterprise features (FIPS 140-2 validation, additional support).

Used by: Signal, Brave, Authy, Standard Notes, BlueWallet, many mobile wallets.

Quick Start (CLI)

# Open encrypted DB
sqlcipher wallet.db
sqlite> PRAGMA key = 'my-strong-passphrase';
sqlite> SELECT count(*) FROM sqlite_master;     -- triggers decryption check

# Encrypt existing plain DB
sqlite> ATTACH DATABASE 'wallet_encrypted.db' AS encrypted KEY 'passphrase';
sqlite> SELECT sqlcipher_export('encrypted');
sqlite> DETACH DATABASE encrypted;

# Decrypt encrypted DB to plain (for migration testing)
sqlite> PRAGMA key = 'passphrase';
sqlite> ATTACH DATABASE 'plain.db' AS plaintext KEY '';
sqlite> SELECT sqlcipher_export('plaintext');
sqlite> DETACH DATABASE plaintext;

Critical: Always set PRAGMA key BEFORE any other query. The first query after open is what triggers decryption — wrong key → "file is not a database" error.

Key Derivation Modes

Passphrase-derived (default)

PRAGMA key = 'user-passphrase';
-- SQLCipher derives 256-bit AES key via PBKDF2-HMAC-SHA512(passphrase, salt, 256000 iter)

Raw key (recommended for wallets)

For wallet apps, derive the key OUTSIDE SQLCipher (from Keychain/Keystore-stored material) and pass as raw hex:

PRAGMA key = "x'2DD29CA851E7B56E4697B0E1F08507293D761A05CE4D1B628AC60AFA59A4FA08'";
-- 64 hex chars = 32 bytes = 256-bit AES key

This bypasses PBKDF2 (faster open) and lets you use proper hardware-backed key storage.

PRAGMA Reference

PRAGMA Purpose Default (v4.x)
PRAGMA key = '...' Set passphrase (required)
PRAGMA key = "x'...'" Set raw 32-byte key (alternative)
PRAGMA rekey = 'new' Change passphrase (re-encrypts whole DB) —
PRAGMA cipher_page_size = 4096 DB page size 4096
PRAGMA kdf_iter = 256000 PBKDF2 iterations 256000 (v4)
PRAGMA cipher_kdf_algorithm = PBKDF2_HMAC_SHA512 KDF algorithm SHA512
PRAGMA cipher_hmac_algorithm = HMAC_SHA512 HMAC SHA512
PRAGMA cipher_use_hmac = ON Per-page HMAC ON
PRAGMA cipher_plaintext_header_size = 0 Bytes left unencrypted at start (rare) 0
PRAGMA cipher_settings Show all current settings —

For maximum compatibility with v3 databases (legacy):

PRAGMA cipher_compatibility = 3;

Rust — rusqlite with bundled-sqlcipher

# Cargo.toml
[dependencies]
rusqlite = { version = "0.32", features = ["bundled-sqlcipher"] }

bundled-sqlcipher compiles SQLCipher from source, statically linked. No system dependency.

use rusqlite::{Connection, params};
use anyhow::Result;

pub struct WalletDb {
    conn: Connection,
}

impl WalletDb {
    pub fn open(path: &str, key: &[u8; 32]) -> Result<Self> {
        let conn = Connection::open(path)?;

        // Set raw key (hex-encoded)
        let key_hex: String = key.iter().map(|b| format!("{:02x}", b)).collect();
        conn.pragma_update(None, "key", format!("x'{}'", key_hex))?;

        // Verify key works (triggers decryption)
        conn.query_row("SELECT count(*) FROM sqlite_master", [], |_| Ok(()))?;

        // Optional tuning
        conn.pragma_update(None, "journal_mode", "WAL")?;
        conn.pragma_update(None, "synchronous", "NORMAL")?;
        conn.pragma_update(None, "cache_size", -65536)?;            // 64MB cache

        // Schema
        conn.execute_batch(include_str!("schema.sql"))?;

        Ok(Self { conn })
    }

    pub fn rekey(&self, new_key: &[u8; 32]) -> Result<()> {
        let key_hex: String = new_key.iter().map(|b| format!("{:02x}", b)).collect();
        self.conn.pragma_update(None, "rekey", format!("x'{}'", key_hex))?;
        Ok(())
    }
}

For BHODL-style wallet:

  • Derive 32-byte AES key from Keystore-wrapped seed material (see mobile/android-native and mobile/ios-native)
  • Pass to WalletDb::open as raw key — never store the key on disk

Android — sqlcipher-android

// build.gradle.kts
implementation("net.zetetic:sqlcipher-android:4.6.1")
implementation("androidx.sqlite:sqlite:2.5.0-alpha10")    // shared interface
import net.zetetic.database.sqlcipher.SQLiteDatabase
import net.zetetic.database.sqlcipher.SupportFactory

// One-time init
SQLiteDatabase.loadLibs(applicationContext)

// Direct usage
val db = SQLiteDatabase.openOrCreateDatabase(
    File(filesDir, "wallet.db"),
    "passphrase",
    null,
    null
)

With Room

val passphrase = getEncryptionKey()                       // from Keystore-wrapped storage
val factory = SupportFactory(passphrase)

val db = Room.databaseBuilder(context, AppDatabase::class.java, "wallet.db")
    .openHelperFactory(factory)
    .build()

With SQLDelight

implementation("net.zetetic:sqlcipher-android:4.6.1")
implementation("androidx.sqlite:sqlite:2.5.0-alpha10")
implementation("app.cash.sqldelight:android-driver:2.0.2")
import app.cash.sqldelight.driver.android.AndroidSqliteDriver
import net.zetetic.database.sqlcipher.SupportFactory

val factory = SupportFactory(passphrase)
val driver = AndroidSqliteDriver(
    schema = AppDatabase.Schema,
    context = context,
    name = "wallet.db",
    factory = factory,
)
val db = AppDatabase(driver)

iOS — SQLCipher (CocoaPods or SwiftPM)

CocoaPods

pod 'SQLCipher', '~> 4.6'

SwiftPM

.package(url: "https://github.com/sqlcipher/sqlcipher-swift", from: "4.6.0")

GRDB.swift with SQLCipher

For typed Swift access:

pod 'GRDB.swift/SQLCipher', '~> 6.0'
pod 'SQLCipher', '~> 4.6'
import GRDB

var config = Configuration()
config.prepareDatabase { db in
    try db.usePassphrase(passphrase)
}

let dbQueue = try DatabaseQueue(path: dbPath, configuration: config)

try dbQueue.write { db in
    try db.execute(sql: """
        CREATE TABLE IF NOT EXISTS wallet (
            id TEXT PRIMARY KEY,
            name TEXT,
            balance INTEGER
        )
    """)
}

Raw SQLite C API

import SQLite3

var db: OpaquePointer?
sqlite3_open(dbPath, &db)

let key = "passphrase"
sqlite3_key(db, key, Int32(key.utf8.count))

// Or raw key
let raw = "x'2DD29CA8...'"
sqlite3_exec(db, "PRAGMA key = \"\(raw)\";", nil, nil, nil)

KMP — SQLDelight with SQLCipher

// shared/build.gradle.kts
sourceSets {
    androidMain.dependencies {
        implementation("net.zetetic:sqlcipher-android:4.6.1")
        implementation("androidx.sqlite:sqlite:2.5.0-alpha10")
        implementation("app.cash.sqldelight:android-driver:2.0.2")
    }
    iosMain.dependencies {
        // iOS Native driver doesn't bundle SQLCipher — use cinterop with SQLCipher.framework
        implementation("app.cash.sqldelight:native-driver:2.0.2")
    }
}

For iOS, you need a custom Native driver wrapping SQLCipher (community packages exist; or write minimal cinterop). The Android side works out-of-box.

Key Rotation

PRAGMA rekey = 'new-passphrase';
-- or
PRAGMA rekey = "x'NEW_HEX_KEY'";

Rewrites every page with new key. Long operation for large DBs (10s of seconds for 100MB).

For atomic rotation with backup:

ATTACH DATABASE 'wallet_new.db' AS new KEY 'new-passphrase';
SELECT sqlcipher_export('new');
DETACH DATABASE new;
-- Then atomically replace old file

Performance Tuning

PRAGMA Recommended for mobile wallet Effect
journal_mode = WAL ✅ Concurrent reads + writes
synchronous = NORMAL ✅ Faster writes, still safe with WAL
cache_size = -65536 ✅ 64MB page cache
temp_store = MEMORY ✅ Temp tables in RAM
cipher_page_size = 4096 (default) Larger pages (8192) help large blob workloads
cipher_use_hmac = ON ✅ Per-page authentication (don't disable)

Backup & Verification

Verify integrity

PRAGMA cipher_integrity_check;
PRAGMA integrity_check;

cipher_integrity_check validates HMACs page-by-page (catches tampering). integrity_check validates SQL structure.

Backup

// rusqlite — backup API works with SQLCipher
let mut backup = Backup::new(&src_conn, &mut dst_conn)?;
backup.run_to_completion(5, Duration::from_millis(250), None)?;

The destination DB inherits the source's key (or set its own with PRAGMA key after attach).

Export plain copy (for testing only — never in production)

PRAGMA key = '...';
ATTACH DATABASE 'plain.db' AS plaintext KEY '';
SELECT sqlcipher_export('plaintext');
DETACH DATABASE plaintext;

Migration from Plain SQLite

fn encrypt_existing_db(plain_path: &str, encrypted_path: &str, key: &[u8; 32]) -> Result<()> {
    let conn = Connection::open(plain_path)?;
    let key_hex: String = key.iter().map(|b| format!("{:02x}", b)).collect();

    conn.execute_batch(&format!(
        "ATTACH DATABASE '{}' AS encrypted KEY \"x'{}'\";
         SELECT sqlcipher_export('encrypted');
         DETACH DATABASE encrypted;",
        encrypted_path, key_hex
    ))?;

    Ok(())
}

Wallet Pattern (BHODL-style)

1. App generates wallet seed (BIP39, in Rust BDK)
2. App generates random 256-bit DB encryption key
3. App opens SQLCipher DB with that key
4. Stores wallet state, transactions, labels (BIP329) inside encrypted DB
5. Encrypts the DB key with Keystore (Android) / Secure Enclave (iOS) wrapped key
6. On unlock: biometric → unwrap DB key → open SQLCipher DB
pub struct EncryptedWallet {
    db: WalletDb,
    bdk_wallet: bdk::Wallet,
}

impl EncryptedWallet {
    pub fn unlock(
        db_path: &str,
        wrapped_db_key: &[u8],
        unwrap_fn: impl FnOnce(&[u8]) -> Result<[u8; 32]>,
    ) -> Result<Self> {
        let db_key = unwrap_fn(wrapped_db_key)?;
        let db = WalletDb::open(db_path, &db_key)?;
        let seed = db.load_encrypted_seed()?;
        let bdk_wallet = bdk::Wallet::new(&seed)?;
        Ok(Self { db, bdk_wallet })
    }
}

Troubleshooting

Symptom Cause Fix
"file is not a database" Wrong key, or key set after first query Set PRAGMA key IMMEDIATELY after open
"file is encrypted or is not a database" (v3 DB on v4) Compatibility PRAGMA cipher_compatibility = 3
Slow open (~500ms) PBKDF2 with 256k iterations Use raw key (x'...') instead of passphrase
Slow inserts No transaction wrap BEGIN; ... ; COMMIT;
WAL files visible (-wal, -shm) Normal — WAL mode Include in backups, delete only via SQLite API
Crash on iOS arm64 sim Wrong arch in static lib Build SQLCipher for aarch64-apple-ios-sim separately
Unable to load library on Android Missing loadLibs(context) Call once at app startup
PRAGMA rekey hangs Operating on huge DB Schedule as background task; not on UI thread
HMAC error after corruption Bit flip from disk Restore from backup; integrity check before commit
Password change loses data Forgot to rekey (just changed key) PRAGMA rekey re-encrypts; PRAGMA key only sets for current connection

Anti-Patterns

Anti-pattern Why it's bad Correct approach
Hardcoded passphrase in source Key extractable Derive at runtime from Keystore/Keychain
Storing DB key in SharedPreferences/UserDefaults Plain text Wrap with hardware-backed key
PRAGMA key after first SELECT Won't take effect Set immediately after open
Disabling cipher_use_hmac No tamper detection Keep HMAC ON
Reducing kdf_iter for "speed" Brute-force easier Keep ≥256k or use raw key
Reusing DB key across users Data leak between accounts One key per account
Sharing DB with extension via plain file Unencrypted at rest Use App Group + same key, not file copies
Not handling KeyPermanentlyInvalidatedException Wallet bricks on biometric re-enroll Plan recovery flow
Storing seed in same DB encrypted with same key If DB key compromised, seed too Layer: Keystore → DB key → DB → encrypted seed inside

When NOT to Use This Skill

Scenario Use Instead
Plain SQLite databases/sql-fundamentals (or relevant skill)
Server PostgreSQL TDE PostgreSQL skill
KMP SQLDelight setup mobile/kotlin-multiplatform/quick-ref/libraries.md
Keystore key derivation mobile/android-native/quick-ref/keystore-biometric.md
Keychain key wrapping mobile/ios-native/quick-ref/secure-storage.md
General-purpose encryption security/libsodium

Use this skill

Connect your agent to the Skill Store MCP server and ask for it by ref: claude-dev-suite/sqlcipher-17012483554.

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Details

Publisher
claude-dev-suite
Category
Data & Analytics › Databases & SQL
License
MIT
Updated
2026-10-19

References

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