contributor at @null-shot @evaafi
Arti contributes skills that equip AI agents with scientific and data tooling, spanning genomic alignment and variant file handling with Pysam, bioinformatics and microbiome diversity analysis with Scikit Bio, and solar physics data workflows with Sunpy. The author's most popular skills also cover video processing and motion estimation, labeled multi-dimensional arrays with Xarray, fast large-scale DataFrame work with Polars, and advanced scikit-learn pipelines, alongside pretrained model use via Transformers.
Scientific Agent Skills
62 skills · 25 stars · MIT
Ase Atomic Simulation Environment - a set of tools for setting up, manipulating, running, visualizing…
Astropy The core library for Astronomy and Astrophysics in Python.
Biopython Comprehensive guide for Biopython - the premier Python library for computational biology and bioi…
Chempy A Python package useful for chemistry (mainly physical/analytical/inorganic chemistry).
Cobrapy Constraints-Based Reconstruction and Analysis for Python.
Dask A flexible library for parallel computing in Python.
Dask Optimization Advanced sub-skill for Dask focused on distributed system performance, memory management, and tas…
Duckdb An analytical in-process SQL database management system.
Example Skill Example skill template.
Fastapi Streamlit Dual skill for deploying scientific models.
Geopandas Open source project to make working with geospatial data in python easier.
H5Py A Pythonic interface to the HDF5 binary data format.
Jax Composable transformations of Python+NumPy programs.
Jax Pde Advanced sub-skill for JAX focused on solving Partial Differential Equations (PDEs) and Different…
Lifelines Complete survival analysis library in Python.
Matplotlib The foundational library for creating static, animated, and interactive visualizations in Python.
Matplotlib Pro Professional sub-skill for Matplotlib focused on high-performance animations, complex multi-figur…
Mdanalysis Comprehensive guide for MDAnalysis - the Python library for analyzing molecular dynamics trajecto…
Mne Open-source Python package for exploring, visualizing, and analyzing human neurophysiological dat…
Networkx Python package for the creation, manipulation, and study of the structure, dynamics, and function…
Numba A Just-In-Time (JIT) compiler for Python that translates a subset of Python and NumPy code into f…
Numpy Comprehensive guide for NumPy - the fundamental package for scientific computing in Python.
Numpy Low Level Advanced sub-skill for NumPy focused on internal memory management, stride manipulation, structur…
Openbabel A chemical toolbox designed to speak the many languages of chemical data.
Opencv Open Source Computer Vision Library (OpenCV) for real-time image processing, video analysis, obje…
Ortools Google Optimization Tools.
Pandas Performance Advanced sub-skill for pandas focused on memory optimization, execution speed, and handling large…
Pennylane Cross-platform Python library for differentiable quantum computing.
Photutils An Astropy coordinated package for detecting and performing photometry of astronomical sources.
Plotly A high-level interactive graphing library for Python.
Polars Blazingly fast DataFrame library written in Rust.
Prody Protein Dynamics, Evolution, and Structure analysis.
Pydicom Python package for working with DICOM files.
Pyomo Python Optimization Modeling Objects.
Pyproj Python interface to PROJ (cartographic projections and coordinate transformations library).
Pysam Python module for reading, manipulating and writing genomic alignment formats (SAM/BAM/CRAM) and…
Pyscf Comprehensive guide for PySCF - Python-based Simulations of Chemistry Framework.
Pytorch Leading deep learning framework.
Pytorch Deployment Advanced sub-skill for PyTorch focused on model productionization and deployment.
Pytorch Research Advanced sub-skill for PyTorch focused on deep research and production engineering.
Qiskit Comprehensive guide for Qiskit - IBM's quantum computing framework.
Qiskit Hardware Advanced sub-skill for Qiskit focused on executing circuits on physical quantum processing units…
Qutip Quantum Toolbox in Python.
Rdkit Open-source cheminformatics and machine learning toolkit for drug discovery, molecular manipulati…
Scanpy Scalable toolkit for analyzing single-cell gene expression data.
Scikit Bio Library for bioinformatics and community ecology statistics.
Scikit Image A collection of algorithms for image processing in Python.
Scikit Learn The industry standard library for machine learning in Python.